PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027101442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WOX | ||||||||
Protein Properties | Length: 395aa MW: 43524.4 Da PI: 8.2557 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.7 | 1.7e-17 | 55 | 115 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_027101442.1 55 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115 89*****************99*************************************995 PP | |||||||
2 | Wus_type_Homeobox | 111.7 | 3.9e-36 | 54 | 117 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq XP_027101442.1 54 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 117 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MASSNRHWPS MFKSKPCNSQ HQWQHEINSS LISNGCQRAP SCASSGSEER SPEPKPRWNP 60 RPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKQRHF 120 QSTTKSQPPQ IPHITSTPPA TKTTSLSSSS SSSEKSSQNS ADKTLSLGPK NLFDTSSSPT 180 ASVNQHFFQS HSAEFLPAPF FFPVQQPPSA AESTPPAAFS QGFCFSDAPS LSHLADNTIQ 240 NSSSILLSDL LLMNHLPTKK VQDEKIKLQQ QLNYTALTTP PITTSQSIFS PTRVAAVSSI 300 DHVHGVGETG SADPTKSTVF INDVAFEVTS AFFNVREAFG DDAVLVHSSG QPVMTNEWGV 360 TLQPLQHGAF YYLIRTSTSS SHDTTIDLIY PTRGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33880.1 | 6e-61 | WOX family protein |