PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101339.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 356aa    MW: 38115.5 Da    PI: 6.0226
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-1775124255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  XP_027101339.1  75 RYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 124
                     59****999.**********954...5999*******************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MSNSTADHLT SHLSQDTDPT LNYSISNNNN SDNATAAAAN ATTTSSGSDL SSGSTSCNNN  60
KKGKGKGGPD NNKFRYRGVR QRSWGKWVAE IREPRKRTRR WLGTFATAED AARAYDRAAI  120
ILYGSRAQLN LQPSSGTGGE SGGAPSDQSS SRSSNSSSST QNLRPLLPRP SGFGLTFYSA  180
PASLPVAGGV VAGYAPYGYY PATVQQYPNM VQCQQNLALQ EPQPQRQQPE EYRTSTIARC  240
HDMNVVLGIV DSSSYITTTS GANPNHEQQQ QEQQYCHNPS KLLYDEVNSL VGSVGSSLSL  300
CCTQTVAAAP APSVSECSDP TVSGCPGSPP LWPLTNDDEY PPTSIWDYGD PSVFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.11e-23ERF family protein