PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027101117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 310aa MW: 35087 Da PI: 5.2449 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.6 | 1.6e-14 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++ G g+W+ +ar g+ R++k+c++rw +yl XP_027101117.1 26 KGLWSPEEDDKLMNYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 73 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.9e-17 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++++lG++ W+ Ia++++ gRt++++k++w++ XP_027101117.1 79 RGAFSPQEEELIIHLHALLGNR-WSQIAARLP-GRTDNEIKNFWNS 122 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MRKPEPSVEK NNNSNNMSNS SVKLRKGLWS PEEDDKLMNY MLTNGQGCWS DVARNAGLQR 60 CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHALLGNR WSQIAARLPG RTDNEIKNFW 120 NSTIKKRLKN SSSPNTSDSS SIQEQSMMGM FVDLSSSASS SMHSMALTNM VDPLPMLEQS 180 LSTSGGTNAG SYFDPQSCIR QAAYDNPTFS TDNLEGQRSI FFPPLEPGEV ERSAITTANF 240 VDRNPTSNTV DNRSNMINYY GNNNYIKVEN ADGYGSYWEA EELRVKEWDL EELMKDASSF 300 PLPDFQKNNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 7e-62 | MYB family protein |