PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027100821.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 382aa MW: 43479.9 Da PI: 4.7074

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027100821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.2	3.4e-35	14	107	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k+ye+++de+++elisws +++nsf+++d ++f++++Lpk+Fkhsnf+SFvRQLn+YgF+k+++++ weF++++F kg+++ll+ XP_027100821.1 14 FLLKIYEMVSDESTDELISWSqTHSNSFIIWDVSRFSSELLPKHFKHSNFSSFVRQLNIYGFHKSDTDR---------WEFSNDEFVKGQRHLLK 99 9******************8888************************************9999.........************* PP XXXXXXXX CS HSF_DNA-bind 96 kikrkkse 103 +i r+k++ XP_027100821.1 100 NIVRRKQT 107 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH 60 SNFSSFVRQL NIYGFHKSDT DRWEFSNDEF VKGQRHLLKN IVRRKQTPAQ AQRKSSQQKD 120 ADPGASEEDR RTALRKEVET LKIDKNTLMQ ELIKLKQHQQ TSQSKLVLVR DQLKGMEKNQ 180 QQMLSFIVMV MQNPGFFIQL LQPKENNWRA AETGMHKFST VDDDCEPLSS DGAIIRYQLP 240 ANEPSEPPCI APSSSSEKPV ELDLSDEIRD LLLSVDFTPL PLDEKMLSLE NHGPLVLPDS 300 PGGDFLMDQL LLSCPLAESK DTDEPDSEVY LDTGMDIESA FQAQESNKLK SPKDGSNQNR 360 WVDTTGIRKQ LDNLESLDFL TV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH  60
SNFSSFVRQL NIYGFHKSDT DRWEFSNDEF VKGQRHLLKN IVRRKQTPAQ AQRKSSQQKD  120
ADPGASEEDR RTALRKEVET LKIDKNTLMQ ELIKLKQHQQ TSQSKLVLVR DQLKGMEKNQ  180
QQMLSFIVMV MQNPGFFIQL LQPKENNWRA AETGMHKFST VDDDCEPLSS DGAIIRYQLP  240
ANEPSEPPCI APSSSSEKPV ELDLSDEIRD LLLSVDFTPL PLDEKMLSLE NHGPLVLPDS  300
PGGDFLMDQL LLSCPLAESK DTDEPDSEVY LDTGMDIESA FQAQESNKLK SPKDGSNQNR  360
WVDTTGIRKQ LDNLESLDFL TV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	7e-83	HSF family protein