PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027100528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TCP | ||||||||
Protein Properties | Length: 270aa MW: 28244.2 Da PI: 9.1986 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 127.2 | 1.7e-39 | 32 | 117 | 3 | 88 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +++s ss+s+++++ XP_027100528.1 32 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKTDGETIQWLLQQAEPSIIAATGTGTIPASALATAASGSSVSEQGNS 117 799*****************************************************************888444444444433332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MAENKPTDIN KDFRILASSD NKDDGGKKQL VPKRSSNKDR HTKVDGRGRR IRMPALCAAR 60 IFQLTRELGH KTDGETIQWL LQQAEPSIIA ATGTGTIPAS ALATAASGSS VSEQGNSVAT 120 GLHHPKFDEV GPGMGIRMNW AALGGNIGRS PHVPAAAWPS VAAGFGSGFL HNSTLLSSNS 180 VNQNLNSGPK FGFQGLEFPS SAGFGQQLPG LELGLSQDGH MGSLNFQALQ QFYQQIGQSG 240 DGAGSGSANN QQQHHPPPAA GGDDSQGSRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 9e-62 | TCP family protein |