PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027100528.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family TCP
Protein Properties Length: 270aa    MW: 28244.2 Da    PI: 9.1986
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027100528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.21.7e-3932117388
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 
                     +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+  +++s ss+s+++++
  XP_027100528.1  32 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKTDGETIQWLLQQAEPSIIAATGTGTIPASALATAASGSSVSEQGNS 117
                     799*****************************************************************888444444444433332 PP

Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAENKPTDIN KDFRILASSD NKDDGGKKQL VPKRSSNKDR HTKVDGRGRR IRMPALCAAR  60
IFQLTRELGH KTDGETIQWL LQQAEPSIIA ATGTGTIPAS ALATAASGSS VSEQGNSVAT  120
GLHHPKFDEV GPGMGIRMNW AALGGNIGRS PHVPAAAWPS VAAGFGSGFL HNSTLLSSNS  180
VNQNLNSGPK FGFQGLEFPS SAGFGQQLPG LELGLSQDGH MGSLNFQALQ QFYQQIGQSG  240
DGAGSGSANN QQQHHPPPAA GGDDSQGSRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.19e-62TCP family protein