PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027100213.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 494aa MW: 55764.6 Da PI: 6.2077

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027100213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.6	1.6e-24	104	157	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_027100213.1 104 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 157 68*****************.9*****************************8 PP
2	Myb_DNA-binding	41.6	2.8e-13	106	156	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ XP_027100213.1 106 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMGvPWLTRENVASHLQKYR 156 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MSVDGETSRV MKGVQHGACD YLLKPIRMKE LRNIWQHVFR KRIHEVRDIE FHEGIDEIHL 60 MKNGSDLSED RHLPSGIDSF SGKKRKEAEK HDDRECNDPS SVKKARVVWT VDLHQKFVKA 120 VNQIGFDKVG PKKILDLMGV PWLTRENVAS HLQKYRLYLG RLQKEKELTT SFGGMKDSDI 180 SAKEPNGNHC LHDLVNKQQC DLASGSYNIQ GNKNMIQNVD LKMHEADLKC TVPKPMEEPK 240 KAIDGESSYP QKSSSKKMSL NHSFGQFDSD LEFAAVIPKQ YPWNEETSQA QFSRERKPHF 300 QPKRGFNTLP PTCLPENIQL DCVQPSSSPN SRPSSIDRDK LAEAEMKPAY VKNRSQGIEQ 360 LSPAGCDADL FSAQPGSKLT NNQAFKPTQS AVWSMNNHSL DEILEGGMES AGRSLNFASG 420 TDYTSWDENV HSGSLQGDFQ PVSTGPQGIE FLNYSEPELT TEVPTFLYDS LKFDSEYPFD 480 SMEYPVIDQG LFIV

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MSVDGETSRV MKGVQHGACD YLLKPIRMKE LRNIWQHVFR KRIHEVRDIE FHEGIDEIHL  60
MKNGSDLSED RHLPSGIDSF SGKKRKEAEK HDDRECNDPS SVKKARVVWT VDLHQKFVKA  120
VNQIGFDKVG PKKILDLMGV PWLTRENVAS HLQKYRLYLG RLQKEKELTT SFGGMKDSDI  180
SAKEPNGNHC LHDLVNKQQC DLASGSYNIQ GNKNMIQNVD LKMHEADLKC TVPKPMEEPK  240
KAIDGESSYP QKSSSKKMSL NHSFGQFDSD LEFAAVIPKQ YPWNEETSQA QFSRERKPHF  300
QPKRGFNTLP PTCLPENIQL DCVQPSSSPN SRPSSIDRDK LAEAEMKPAY VKNRSQGIEQ  360
LSPAGCDADL FSAQPGSKLT NNQAFKPTQS AVWSMNNHSL DEILEGGMES AGRSLNFASG  420
TDYTSWDENV HSGSLQGDFQ PVSTGPQGIE FLNYSEPELT TEVPTFLYDS LKFDSEYPFD  480
SMEYPVIDQG LFIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-64	ARR-B family protein