PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027099700.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 300aa MW: 33328.1 Da PI: 10.2112

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027099700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73.9	2.3e-23	15	67	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rl+Wt+ LH++Fv+av+qLGG+ +AtPk i+++m++k +t +h+kS LQ YRl XP_027099700.1 15 FRLKWTKLLHDCFVKAVNQLGGAYEATPKDIVKVMGIKEITTDHIKSYLQ-YRL 67 69***********************************************9.776 PP
2	Myb_DNA-binding	34.7	4e-11	16	64	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r++WT+ +++ +v+av+qlGg t+k I + mg k t ++ks++q XP_027099700.1 16 RLKWTKLLHDCFVKAVNQLGGAyeaTPKDIVKVMGiKEITTDHIKSYLQ 64 89****************99***********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MEAKNGGQVQ GKKKFRLKWT KLLHDCFVKA VNQLGGAYEA TPKDIVKVMG IKEITTDHIK 60 SYLQYRLSQE VYGAAYTKAA WSGSRMMLEA IQEKEQRRNL ARQMNEASIR IQTSKGKSPL 120 IEGQTNSYKE IEVPRTINGQ NLQAEEAETT KCQLFPPATN DQLPVHPLSN WLTLYEAPSA 180 NHVKRIQPAK ADYANASVSK TEKKLQTLQT AKDKSAWLLR TKSSEGKGLL SWPPASMRDG 240 IFAGKTMTRH QSYRDLTSTS GGLQVGGKIT STKGKLATEN EPIDLNVSAE DIYGALKRAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	1e-17	G2-like family protein