PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027099698.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 301aa MW: 33456.2 Da PI: 10.2547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027099698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.8	1.8e-26	15	68	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rl+Wt+ LH++Fv+av+qLGG+ +AtPk i+++m++k +t +h+kS LQkYRl XP_027099698.1 15 FRLKWTKLLHDCFVKAVNQLGGAYEATPKDIVKVMGIKEITTDHIKSYLQKYRL 68 69***************************************************8 PP
2	Myb_DNA-binding	40.3	7.4e-13	16	67	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+ +++ +v+av+qlGg t+k I + mg k t ++ks++qky+ XP_027099698.1 16 RLKWTKLLHDCFVKAVNQLGGAyeaTPKDIVKVMGiKEITTDHIKSYLQKYR 67 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MEAKNGGQVQ GKKKFRLKWT KLLHDCFVKA VNQLGGAYEA TPKDIVKVMG IKEITTDHIK 60 SYLQKYRLSQ EVYGAAYTKA AWSGSRMMLE AIQEKEQRRN LARQMNEASI RIQTSKGKSP 120 LIEGQTNSYK EIEVPRTING QNLQAEEAET TKCQLFPPAT NDQLPVHPLS NWLTLYEAPS 180 ANHVKRIQPA KADYANASVS KTEKKLQTLQ TAKDKSAWLL RTKSSEGKGL LSWPPASMRD 240 GIFAGKTMTR HQSYRDLTST SGGLQVGGKI TSTKGKLATE NEPIDLNVSA EDIYGALKRA 300 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	1e-19	G2-like family protein