PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027099468.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 191aa MW: 21336.9 Da PI: 9.9897

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027099468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.5e-33	111	169	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+ XP_027099468.1 111 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDEGVVVTTYEGMHSHP 169 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MENYSPIFQY SSSTLTSSAS ASAAPMLLMN PMTSNATGST EHQSHDKANN GVLGLMSSVE 60 APTSGVISNL SRSSSSFVGT ETEVKSGKKK ADKKIRKPRY AFQTRSQVDI LDDGYRWRKY 120 GQKAVKNNKF PRSYYRCTHQ GCNVKKQVQR LSKDEGVVVT TYEGMHSHPI EKSTDNFEHI 180 LTQMQIYTTS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	3e-59	WRKY family protein