PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027098991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 551aa MW: 64579.8 Da PI: 7.9472 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 74.9 | 1.7e-23 | 80 | 167 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++++leHnHel XP_027098991.1 80 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDIVLEHNHEL 167 6*****************9998.8999****************9999.999*******************999****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence |
MEFNMEEDAY KFYNKYAFKM GFSVRKDYLN KDKDYLVYFM RLSLTNDIRS RSEVTDCSKL 60 AEDGTPELGM EFNSEEDAYQ FYNKYAFKMG FSVRKDYLNK DKDGVTTSRR YSCCKEGVKR 120 KYEGDVMPKR TRAPTKTGCG AKMVIVLFRG TMKYRVHDIV LEHNHELHIV QCAHMMPSQR 180 KVSEAQGFQA EISEDAGLSL KQSHELMGKE AGGMGNVGYT REDLKRYLRT RRERSLKYGE 240 AGSMLNYFQE QTLENPSFFH AVQLDCEDQI TNIFWADAGM LIDYKFFGDV VTFDTTYKTN 300 KEYRPLGVFV GFNQHRQIVI FGAALMYDET IDSFKWVFGT FLEAMCGKRP STILTDQDHA 360 MAVALSVVMP KTFHGLCTFH IRRTFMKHLG NHYKENSDLP YMFGACMYEF EEVEQFNRVW 420 EAMVKKHNLE NNEWLSGLYR IRDKWARCMM KERWTAGMRS TQLSESLNAA IKNHLKLDHD 480 LVQFFRHFNR VVDEKRYNEL IAEYEMRQKL PMVGLRQTPM LVHASETYSP TVFVAFQNEY 540 GESTAMVILR Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-89 | FAR1 family protein |