PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027098964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 220aa MW: 25126.4 Da PI: 8.4905 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.8 | 2.1e-19 | 74 | 128 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k XP_027098964.1 74 RKKLCLTKAQSALLEESFKQHSTLNPKQKQDLARELNLRPRQVEVWFQNRRARTK 128 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.5 | 8.8e-39 | 74 | 163 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+ l+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+ +Lk++y++l++en+rLeke +eL+ +l XP_027098964.1 74 RKKLCLTKAQSALLEESFKQHSTLNPKQKQDLARELNLRPRQVEVWFQNRRARTKLKQTEVDCGFLKKCYETLTDENRRLEKELQELK-AL 163 6999***********************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MGKRNPFERW GFEGELKIKQ DHQSADLHRQ DSAASSFSNN SVKRERELGS SEEVEIETVS 60 SRVSDEDDDG SNGRKKLCLT KAQSALLEES FKQHSTLNPK QKQDLARELN LRPRQVEVWF 120 QNRRARTKLK QTEVDCGFLK KCYETLTDEN RRLEKELQEL KALKLAQPLY CMQLPMAILT 180 MCPSCERVGR VGENSSSKSP FSMAPKPHFF NSLTNPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 131 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 3e-64 | HD-ZIP family protein |