PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027098048.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 384aa MW: 43729.1 Da PI: 4.7166

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027098048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.2	3.5e-35	14	107	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k+ye+++de+++elisws +++nsf+++d ++f++++Lpk+Fkhsnf+SFvRQLn+YgF+k+++++ weF++++F kg+++ll+ XP_027098048.1 14 FLLKIYEMVSDESTDELISWSqTHSNSFIIWDVSRFSSELLPKHFKHSNFSSFVRQLNIYGFHKSDTDR---------WEFSNDEFVKGQRHLLK 99 9******************8888************************************9999.........************* PP XXXXXXXX CS HSF_DNA-bind 96 kikrkkse 103 +i r+k++ XP_027098048.1 100 NIVRRKQT 107 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH 60 SNFSSFVRQL NIYGFHKSDT DRWEFSNDEF VKGQRHLLKN IVRRKQTPAQ AQRKSSQQKD 120 ADPGASEEDR RTALRKEVET LKIDKNTLMQ ELIKLKQHQH EQTSQSKLVL VRDQLKGMEK 180 NQQQMLSFIV MVMQNPGFFI QLLQPKENNW RAAETGKHKF STVDDDCEPL SSDGAIIRYQ 240 LPANEPSEPP CIAPSSSSEK PVELDLSDEI RDLLLSVDFT PLPLDEKMLS LENHGPLVLP 300 DSPGGDFLMD QLLLSCPLAE SKDTDEPDSE VYLDTGMDIE SAFQAQESNK LKSPKDGSNQ 360 NRWVDTTGIR NQLDNLESLD FLTV

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH  60
SNFSSFVRQL NIYGFHKSDT DRWEFSNDEF VKGQRHLLKN IVRRKQTPAQ AQRKSSQQKD  120
ADPGASEEDR RTALRKEVET LKIDKNTLMQ ELIKLKQHQH EQTSQSKLVL VRDQLKGMEK  180
NQQQMLSFIV MVMQNPGFFI QLLQPKENNW RAAETGKHKF STVDDDCEPL SSDGAIIRYQ  240
LPANEPSEPP CIAPSSSSEK PVELDLSDEI RDLLLSVDFT PLPLDEKMLS LENHGPLVLP  300
DSPGGDFLMD QLLLSCPLAE SKDTDEPDSE VYLDTGMDIE SAFQAQESNK LKSPKDGSNQ  360
NRWVDTTGIR NQLDNLESLD FLTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	7e-81	HSF family protein