PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027097982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 280aa MW: 30793.4 Da PI: 5.6191 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.8 | 6.8e-07 | 9 | 41 | 19 | 55 |
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f+ Lrel+P++ ++K + a+ L +++eY+++Lq XP_027097982.1 9 IFQILRELIPHS----DQKRDTASFLLEVIEYVQYLQ 41 599********9....8*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MVGAIIVSIF QILRELIPHS DQKRDTASFL LEVIEYVQYL QEKVQKCEGS YQAWNSEPTK 60 LMPWRNSHWR TQSFVSHPQT MKNGSGSGPL YPGRLEDNNI TVSSTVQPSQ QNPIESDLGR 120 EVTSKTMDQQ TELTNQAMPM PMPLQAAMPV PIQNDGAFSH SQPRPAPDAQ SSDCPITDDM 180 LNHPEGLTIE GGTISISSIY SQGLLNTLTQ ALQTAGVDLS QATVSVQINL GKQANRGLAS 240 GISVTKDHER RSPSGDQLAG QYRDTSNGED FSQAQKRLKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 2e-57 | bHLH family protein |