PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027097977.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 334aa MW: 36994.8 Da PI: 6.1151

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027097977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.1	4.9e-16	46	95	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lrel+P++ ++K + a+ L +++eY+++Lq XP_027097977.1 46 RSKHSVTEQRRRSKINERFQILRELIPHS----DQKRDTASFLLEVIEYVQYLQ 95 889***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MKSGKGHQEE EEEEEEDFGA KKDSTPSQNN PKGADGKSSD KANAMRSKHS VTEQRRRSKI 60 NERFQILREL IPHSDQKRDT ASFLLEVIEY VQYLQEKVQK CEGSYQAWNS EPTKLMPWRN 120 SHWRTQSFVS HPQTMKNGSG SGPLYPGRLE DNNITVSSTV QPSQQNPIES DLGREVTSKT 180 MDQQTELTNQ AMPMPMPLQA AMPVPIQNDG AFSHSQPRPA PDAQSSDCPI TDDMLNHPEG 240 LTIEGGTISI SSIYSQGLLN TLTQALQTAG VDLSQATVSV QINLGKQANR GLASGISVTK 300 DHERRSPSGD QLAGQYRDTS NGEDFSQAQK RLKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	3e-80	bHLH family protein