PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027097731.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 314aa    MW: 35496.9 Da    PI: 8.0124
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027097731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-322276155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+WtpeLH rFv+av+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl
  XP_027097731.1 22 KPRLKWTPELHLRFVDAVNQLGGADKATPKSLMRVMGIHGLTLYHLKSHLQKYRL 76
                    79****************************************************8 PP
2Myb_DNA-binding61.81.4e-192475148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e+++++vdav+qlGg    t+k+ +r mg  g+tl+++ks++qky+
   XP_027097731.1 24 RLKWTPELHLRFVDAVNQLGGAdkaTPKSLMRVMGiHGLTLYHLKSHLQKYR 75
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSLQNQNLQN NDMALVLSSD AKPRLKWTPE LHLRFVDAVN QLGGADKATP KSLMRVMGIH  60
GLTLYHLKSH LQKYRLGKSQ QSQHYNEKER ENQRSHFTAE VCEETQNQTN ESLQIAQALH  120
MQMEVQRKLY EQLEVQRHLQ LRIEAQGKYL QSVLKKAQET LAEYNTSAAG VELAKAELSQ  180
LVSMVDIGCP TSSLSALTEI EGPILKDTDN KQLTSNGCSM ESSLTSSESS GRKEQTQPMH  240
EIDEKGKCNR NNIVLSLMEM QPGQNSRSNN QASERKRTGS NTSVEKPLPK RFQPQRSDEQ  300
TGKFGFLETL DLNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-76G2-like family protein