PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027097730.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 315aa    MW: 35569.9 Da    PI: 7.0645
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027097730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-322276155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+WtpeLH rFv+av+qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl
  XP_027097730.1 22 KPRLKWTPELHLRFVDAVNQLGGADKATPKSLMRVMGIHGLTLYHLKSHLQKYRL 76
                    79****************************************************8 PP
2Myb_DNA-binding61.81.4e-192475148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e+++++vdav+qlGg    t+k+ +r mg  g+tl+++ks++qky+
   XP_027097730.1 24 RLKWTPELHLRFVDAVNQLGGAdkaTPKSLMRVMGiHGLTLYHLKSHLQKYR 75
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSLQNQNLQN NDMALVLSSD AKPRLKWTPE LHLRFVDAVN QLGGADKATP KSLMRVMGIH  60
GLTLYHLKSH LQKYRLGKSQ QSQHYNESKP EEERENQRSH FTAEVCEETQ NQTNESLQIA  120
QALHMQMEVQ RKLYEQLEVQ RHLQLRIEAQ GKYLQSVLKK AQETLAEYNT SAAGVELAKA  180
ELSQLVSMVD IGCPTSSLSA LTEIEGPILK DTDNKQLTSN GCSMESSLTS SESSGRKEQT  240
QPMHEIDEKG KCNRNNIVLS LMEMQPGQNS RSNNQASERK RTGSNTSVEK PLPKRFQPQR  300
SDEQTGHQYP PLLDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.12e-77G2-like family protein