PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027097334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 638aa MW: 68795.1 Da PI: 5.57 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 449.7 | 2e-137 | 258 | 636 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv++L++cAea+++++++la+al++++ la +++ +m+++a+yf+eALa+r++r l p++ +++ ++ + f+e++P++kf+h XP_027097334.1 258 LVHALMACAEAIQQENMKLAEALVKHIGFLAVSQAGAMRKVATYFAEALARRIYR--------LYPTSPHDSAFTDL--LQMHFYETCPYIKFAH 342 689****************************************************........44444443334444..4446************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +taNqaIlea+++++rvH+iDf+++qG+QWpaLlqaLa Rp+gpps+R+Tg+g+p++++++ l+e+g++La++A+ ++v+fef+ +va++l+dl+ XP_027097334.1 343 FTANQAILEAFANKNRVHVIDFSMKQGMQWPALLQALALRPGGPPSFRLTGIGPPSHDNTDHLQEVGWKLAQLADCIKVEFEFRGFVANSLADLD 437 *********************************************************************************************** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........... 274 +++++++gE++aVn++++lh+ll++++++e+ vL++vk+l+P++++vveqea+hn++ Fl+rf+e+l+yys+lfdsle XP_027097334.1 438 ASMFDIREGETVAVNSIFELHQLLSRPGAIEK----VLSAVKELKPEILTVVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCgsggggnggvd 528 ************************99999999....*********************************************98889********* PP GRAS 275 ........lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360 + + s++++++++++lgr+i+nvvaceg +r+erhetl++Wr r+++aGF++v+l+++a kqa++ll+ ++ +dgyrvee++gsl+l XP_027097334.1 529 ggsssgggV-AVSDQDKVMSEVYLGRQICNVVACEGVDRVERHETLAQWRTRFGSAGFEAVHLGSNAFKQASMLLALFAgGDGYRVEENNGSLML 622 **9999853.56799999***************************************************************************** PP GRAS 361 gWkdrpLvsvSaWr 374 gW++rpL+++SaW+ XP_027097334.1 623 GWHTRPLIATSAWK 636 *************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence |
MKRNHPKLQQ STAAAARVQV QESSYSGGGG SSTGSGSCYS TMASCSSAGG GSRSKGKMWV 60 DESDQQDDEL LAVLGYKVKA SDMAEVAQKI EQLEEVFGNA ENDSLSHLVS ETVHYNPSDL 120 SSWLGSMISE LYPDMSSIPD SSAISSLDNC SSNNTTSNSA RTLHNYPNSN RVIFDDSSFD 180 SDLTAIPGKA AVYPQIQQLP SPVSVSPGSV QPPSKRMKPS SQLGGWGTPS ESIITNSRAV 240 ASTRPVVLVD SQENGIRLVH ALMACAEAIQ QENMKLAEAL VKHIGFLAVS QAGAMRKVAT 300 YFAEALARRI YRLYPTSPHD SAFTDLLQMH FYETCPYIKF AHFTANQAIL EAFANKNRVH 360 VIDFSMKQGM QWPALLQALA LRPGGPPSFR LTGIGPPSHD NTDHLQEVGW KLAQLADCIK 420 VEFEFRGFVA NSLADLDASM FDIREGETVA VNSIFELHQL LSRPGAIEKV LSAVKELKPE 480 ILTVVEQEAN HNGPVFLDRF TESLHYYSTL FDSLEGCGSG GGGNGGVDGG SSSGGGVAVS 540 DQDKVMSEVY LGRQICNVVA CEGVDRVERH ETLAQWRTRF GSAGFEAVHL GSNAFKQASM 600 LLALFAGGDG YRVEENNGSL MLGWHTRPLI ATSAWKLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 0.0 | GRAS family protein |