PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096970.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 381aa    MW: 42304.1 Da    PI: 4.3423
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19122171154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     ++ykGVr++k +g+W+AeIrd +     + kr++lg++ ++eeA +a++a r+++e
  XP_027096970.1 122 TKYKGVRQRK-WGKWAAEIRDpF-----KgKRIWLGTYISPEEASRAYEAKRLEFE 171
                     69*******9.**********55.....45***********************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MPEPRRQVIL NQEHHNKRPK IMAEPTRPVR KIRVFCDDPD ATDTDSSDDE RVIEKKPKRF  60
LREIILPIVE LKSQPGQPVA VALAPEAENS CQESNNGEKN NPKKKKGLAK PLSQPQSKPS  120
STKYKGVRQR KWGKWAAEIR DPFKGKRIWL GTYISPEEAS RAYEAKRLEF EARAMADQNA  180
SEKCSNVNDD NNNNQSSSMA VSQPHNQNEA PACVSEDSAE SLVSHTSPAS VLELDCLTSS  240
ATPAMASVDG EKQDEEEKVK NVAEGTKVVE QKVPDLDLMM EDELSLAELA QGMELDFELN  300
SLFMGEEEFG QSLGDFVIGD IEDIPICGFE DDQPSALPDF DFEFDFDACN EAFSWMDDGP  360
ALMNGASPLE NQHSVPISFA A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.14e-23ERF family protein