PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096746.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 273aa    MW: 30218.6 Da    PI: 10.0796
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.92e-1211402655
         G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    +AtPk i+++m++k +t +h+kS LQkYRl
  XP_027096746.1 11 EATPKDIVKVMGIKEITTDHIKSYLQKYRL 40
                    6****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MLNRKFAMHV EATPKDIVKV MGIKEITTDH IKSYLQKYRL SQEVYGAAYT KAAWSGSRMM  60
LEAIQEKEQR RNLARQMNGA SICIQTSKGK SPLIEGQTNS CKEIEVPWTI NGQNLQAEEA  120
ETTKCQLFPP ATNDQLPVHP LSSWLTLYEA PSANHVKRIQ AAKADYANAS VSKTEKKLQT  180
LQTAKDKSAW LLRTKSSEGK GLLSWPPASM RDGIFAGKTM TRHQSYRDLT STSGGLQVGG  240
KITSTKGKLA TENEPIDLNV SAQDMYGALK RAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.32e-08G2-like family protein