PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027096745.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 293aa MW: 32418.1 Da PI: 10.1454

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027096745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.9	1.7e-26	15	68	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rl+Wt+ LH++Fv+av+qLGG+ +AtPk i+++m++k +t +h+kS LQkYRl XP_027096745.1 15 FRLKWTKLLHDCFVKAVNQLGGAYEATPKDIVKVMGIKEITTDHIKSYLQKYRL 68 69***************************************************8 PP
2	Myb_DNA-binding	40.3	7.1e-13	16	67	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+ +++ +v+av+qlGg t+k I + mg k t ++ks++qky+ XP_027096745.1 16 RLKWTKLLHDCFVKAVNQLGGAyeaTPKDIVKVMGiKEITTDHIKSYLQKYR 67 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MEAKYGGQVQ GKKKFRLKWT KLLHDCFVKA VNQLGGAYEA TPKDIVKVMG IKEITTDHIK 60 SYLQKYRLSQ EVYGAAYTKA AWSGSRMMLE AIQEKEQRRN LARQMNGASI CIQTSKGKSP 120 LIEGQTNSCK EIENLQAEEA ETTKCQLFPP ATNDQLPVHP LSSWLTLYEA PSANHVKRIQ 180 AAKADYANAS VSKTEKKLQT LQTAKDKSAW LLRTKSSEGK GLLSWPPASM RDGIFAGKTM 240 TRHQSYRDLT STSGGLQVGG KITSTKGKLA TENEPIDLNV SAQDMYGALK RAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	6e-20	G2-like family protein