PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096744.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 301aa    MW: 33314.2 Da    PI: 10.1454
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like83.81.8e-261568255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     rl+Wt+ LH++Fv+av+qLGG+ +AtPk i+++m++k +t +h+kS LQkYRl
  XP_027096744.1 15 FRLKWTKLLHDCFVKAVNQLGGAYEATPKDIVKVMGIKEITTDHIKSYLQKYRL 68
                    69***************************************************8 PP
2Myb_DNA-binding40.37.4e-131667148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+ +++ +v+av+qlGg    t+k I + mg k  t  ++ks++qky+
   XP_027096744.1 16 RLKWTKLLHDCFVKAVNQLGGAyeaTPKDIVKVMGiKEITTDHIKSYLQKYR 67
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEAKYGGQVQ GKKKFRLKWT KLLHDCFVKA VNQLGGAYEA TPKDIVKVMG IKEITTDHIK  60
SYLQKYRLSQ EVYGAAYTKA AWSGSRMMLE AIQEKEQRRN LARQMNGASI CIQTSKGKSP  120
LIEGQTNSCK EIEVPWTING QNLQAEEAET TKCQLFPPAT NDQLPVHPLS SWLTLYEAPS  180
ANHVKRIQAA KADYANASVS KTEKKLQTLQ TAKDKSAWLL RTKSSEGKGL LSWPPASMRD  240
GIFAGKTMTR HQSYRDLTST SGGLQVGGKI TSTKGKLATE NEPIDLNVSA QDMYGALKRA  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.18e-20G2-like family protein