PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027096429.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 582aa    MW: 66378.3 Da    PI: 8.1136
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027096429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.11.2e-1121965661374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +++lL++cA+ +s+ d++ a++lL+++++++sp+gd ++Rla+yf+ AL+ar++++++++y a++++ ++    +++l+a++++  +sP+ k+s+
  XP_027096429.1 196 MRSLLTQCAQSISDFDNRTANQLLNQIRQHSSPHGDGNERLAHYFADALEARVSGMGTTMYTAFSTRVSA----ADTLKAYQAYILASPFRKMSN 286
                     5799*********************************************************999999986....99******************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +++ ++I + + +++++HiiDf+i +G++Wp+++qaL++Rp+gpp+lRiTg++ p++g   +e++eetg+rLa+++++++vpfe+++ +a+++e+
  XP_027096429.1 287 ILTGKTIQKLTTEASQIHIIDFGILYGFHWPCFIQALSKRPRGPPKLRITGIDLPQPGlrPAERVEETGRRLAHYCKKFNVPFEYHA-IARKWET 380
                     ***************************************************************************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++leeL++++ E+++  + ++l +++de+  ++s+rd+vL+l+k+++P+++v+   +  +n++ F+ rf eal+++s+lfd+++++lpr++++r 
  XP_027096429.1 381 ISLEELKIDRCETVIATCLYRLRNVPDETSVTSSARDTVLHLIKKINPDLFVHGILNGTYNAPFFVMRFREALHHFSSLFDMFDKTLPRHDQDRL 475
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + E+e+lgr+ +nv+aceg++r+er et+++W++r e+aGF+++pl+++++k++++ ++  + + + v+e+ +++++gWk+r ++++S W+
  XP_027096429.1 476 VFEKEVLGRQSMNVIACEGTARIERPETYKQWQARNERAGFRQIPLNKDIVKEVRAKVKLQYHKDFLVDEDGKWILQGWKGRVIYALSYWK 566
                     **************************************************************888*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MAGFEYDFPS ITSSGPLNLS NFPVDALPGE HDGDSSLPGD TFGAVLQYLN QMLMGEDLEQ  60
RPCMYQELSA LQAAEKSFYD ALTGVEVIKV ADEKEKERDK FTNGSAKKRN HYRQDDEHVE  120
AGRATKQFAS YAEEPTEIFD EALLCSSSNA GSWDLSYCEA KPGRRNNQQI GLTQEPKRGR  180
PRASERKLNI REVVDMRSLL TQCAQSISDF DNRTANQLLN QIRQHSSPHG DGNERLAHYF  240
ADALEARVSG MGTTMYTAFS TRVSAADTLK AYQAYILASP FRKMSNILTG KTIQKLTTEA  300
SQIHIIDFGI LYGFHWPCFI QALSKRPRGP PKLRITGIDL PQPGLRPAER VEETGRRLAH  360
YCKKFNVPFE YHAIARKWET ISLEELKIDR CETVIATCLY RLRNVPDETS VTSSARDTVL  420
HLIKKINPDL FVHGILNGTY NAPFFVMRFR EALHHFSSLF DMFDKTLPRH DQDRLVFEKE  480
VLGRQSMNVI ACEGTARIER PETYKQWQAR NERAGFRQIP LNKDIVKEVR AKVKLQYHKD  540
FLVDEDGKWI LQGWKGRVIY ALSYWKPAHE RIGVSVVLQC SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46600.11e-173GRAS family protein