PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027095756.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 331aa MW: 35614 Da PI: 5.5817

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027095756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	6.9e-33	192	249	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ XP_027095756.1 192 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHH 249 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEDGGGKGDV DPAVTTESSC WRSVLGDATD SMVDNVYFFG TATTSINDDR DTSILSEFGW 60 NLPPPPPHSG TSAGLLHSGF DRIITDSDLA GNDTHTTLFA RENENTSAAD DAATPATAAA 120 SASVDVEAAE PQPMTMSSSS SDDLPEKSTA SGGSSADKQP SDTASKAKKK GQKRIRQPRF 180 AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER SSEDPTIVIT 240 TYEGQHCHHT VGFPRGGLIS HEVPFGSQLT PSSSQFYYPG VQFPQGSVGI QESFNVSRES 300 GHSHAPSDPS GRIFTDEGLL GDMVPPGMRK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	2e-63	WRKY family protein