PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027095617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 271aa MW: 29946.6 Da PI: 6.8452 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.9 | 1.8e-08 | 157 | 204 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++Y++sLq XP_027095617.1 157 SHSLAERMRREKINQKLRCLQDLVPGC----YKSMGMAVMLDVIINYVRSLQ 204 8*************************8....355888889999999988887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MMNSNMDVVN SLTEIDSFNP NVQELLSLTT HVGFSDHNRQ QSQIPFCFSN DASHNPNANH 60 PHHLQVPLDF ESAAQFFPQG GVPISHGCND SNSSLSEPDY LANSSSRGSA SAGIPVNKPK 120 GTYNYGEKKR KRSNGKETEK PKEVVHVRAK RGQATDSHSL AERMRREKIN QKLRCLQDLV 180 PGCYKSMGMA VMLDVIINYV RSLQNQIDFL SMKLSAASLF YDFNSLDMDA VPPTQACANF 240 PGPPGCEAQG LEKMVGEGYG ELPQFHTSWP L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 133 | KKRKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 6e-57 | bHLH family protein |