PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027095442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 258aa MW: 29342 Da PI: 8.0354 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.4 | 2.8e-06 | 95 | 114 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C+k+F+r n++ H+ XP_027095442.1 95 FSCPVCNKTFNRYNNMQMHM 114 89*****************9 PP | |||||||
2 | zf-C2H2 | 16.9 | 1.8e-05 | 180 | 202 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ XP_027095442.1 180 FQCRKCGKPFAVRGDWRTHEKNC 202 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MQRIHCCSNI SSGQNNTSKN LLDCSFEYSS CQLPQDNYQQ CPRTSAENGV TVALHIGLPT 60 SEASSTSHAH NFGVLPEGQY WIPTPAQILV GPTQFSCPVC NKTFNRYNNM QMHMWGHGSQ 120 YRKGPESLRG TKPASSMLKL PCYCCAEGCK NNIDHPRSRP LKDFRTLQTH YKRKHGTKPF 180 QCRKCGKPFA VRGDWRTHEK NCGKLWFCIC GSDFKHKRSL KDHIRAFGDG HAAHSQDLRG 240 IEELVELEED DEEEEDNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13290.1 | 1e-116 | C2H2 family protein |