PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027094753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 441aa MW: 47819.2 Da PI: 8.5564 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.6 | 6.2e-05 | 332 | 370 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq XP_027094753.1 332 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 370 7788899*********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 441 aa Download sequence |
MESTSKIPHH HRHLQQQHPL QGHQLVGSSS TSTTTLGASG FGAALGSHAW TPNTNLNSAG 60 FGSAANTAIL NSRNPRLEND ILVSSLNGSM TQDFSFSWAN GSRGNNFTNQ SSHDLQLEMI 120 KREFSESYSN FSEMISSPSS SVEDVQLPIQ ATDYRRSEYR EINDPNVKLL LRSLSSGDRN 180 NDFHRSCPGE LYCSTSSSSS LGATPKRGTF SQIYPTINVS EINQTSLANS SSFHMNSQAL 240 DLVNSARFSG IFCLPMVDQL GLSKNGSLSY GYDYLSQSIP MPISEPSNIT PLSYGVTETK 300 RSDISLEPKV PQAAPKRSRS ESRASCPPFK VRKEKLGDRI AALQQLVAPF GKTDTASVLM 360 EAIGYIKFLQ NQVETLSVPY LKSSRNKSSR TVHGGAVENG GEERKRDLRS RGLCLVPMSC 420 LSYVADGGGG VWPPPSFGGG T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 4e-69 | bHLH family protein |