PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094526.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 307aa    MW: 32502 Da    PI: 5.4321
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.21.9e-17223259135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp g++tLCnaCGl+++ kg+
  XP_027094526.1 223 CTHCGTSSksTPMMRRGPAGPRTLCNACGLFWANKGT 259
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MYTPVQLVGP TNGHGQYSSH GGGDDVKAAV FGGGGGGRES IEDTEIVGFE DGGTIGGLDG  60
IEVSLPQNTT LYGGGGGGGE GVAMAMPHGG DVANQLTLSF RGQVYVFDAV TAEKVQAVLS  120
LLGGCEYTPG TQAVDLPYQT SKSLMDYSGR CNDPKRVESL NRFRQKRKER CFDKKIRYNV  180
RQEVAMKMQR KKGQFAPRSS EDSVACDVAE ESGQIDNPPE TSCTHCGTSS KSTPMMRRGP  240
AGPRTLCNAC GLFWANKGTL RDLSKKTHAV TEEDEADSDS DYGTPISARG NLVSFSTSTS  300
SAVAAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-76GATA family protein