PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094086.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 611aa    MW: 68680 Da    PI: 4.6095
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4455e-1362436113374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA a+++g++ +a++++++l++++s +g+p +R+aay++eAL ar+a s+++lykal+++e +   ss++l+a+++++ev+P+++f+++t
  XP_027094086.1 243 QMLFDCAAAIQDGNFDEASTIINELRQRVSIQGEPPERIAAYMVEALVARMATSGKGLYKALKCKEPP---SSDRLSAMQVLFEVCPCFRFGFMT 334
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aIlea + e+rvHiiDfdi+qG Q+ +Llq+La+ p +p +lR+Tgv++pes+      l+ +g+ L+ fAe l++p+ f+  va +++d++
  XP_027094086.1 335 ANGAILEACKDEKRVHIIDFDINQGSQYYTLLQTLAQLPYKPSHLRLTGVDDPESVqrAVGGLNIIGQMLETFAEDLKIPLTFHS-VAAKTADID 428
                     ******************************************************99878889***********************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++kpgEal+Vn+++qlh+++desvs+ ++rd++L++vk+l+Pk+v++veq++++n+++Fl+rf+ea +yysa+fdslea+lpr+ +er++v
  XP_027094086.1 429 PSMLDCKPGEALIVNFAFQLHHMPDESVSTVNQRDQLLRMVKGLNPKLVTLVEQDVNTNTAPFLQRFAEAYSYYSAVFDSLEATLPRDGQERMNV 523
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+i n+vaceg+er+er e ++kWr+r+++aGF++ p+++++ ++++ l+++++++ y+v+ee g++ +gW+d+ L+++SaWr
  XP_027094086.1 524 ERQCLARDIINIVACEGEERIERYEVAGKWRARMMMAGFTSSPIGQNVKDEIRKLIKQYSER-YKVKEETGAVHFGWEDKILIAASAWR 611
                     ************************************************************66.*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
MFARTSVETG TETLAAQSRR QFWTEEEIFY AQTSFLANEK SDMSLVKSAS SFRNRKLYSL  60
KDSRNNSGFS KAILEKQQGI TYSSESYSDG SYDPKYFLES PSEEFAHSSI SDVLGIRFDS  120
PHPSSNQLLA GQHSFSNSFM PAKQCDTYEF SFESEYLGAE DPDATDYDED EVRLKLQELE  180
RALFDDNNIV DNDLLETEHG WADSTENVLL HDSPKESSSS DSNLSSISSN KEISVTTPPG  240
PKQMLFDCAA AIQDGNFDEA STIINELRQR VSIQGEPPER IAAYMVEALV ARMATSGKGL  300
YKALKCKEPP SSDRLSAMQV LFEVCPCFRF GFMTANGAIL EACKDEKRVH IIDFDINQGS  360
QYYTLLQTLA QLPYKPSHLR LTGVDDPESV QRAVGGLNII GQMLETFAED LKIPLTFHSV  420
AAKTADIDPS MLDCKPGEAL IVNFAFQLHH MPDESVSTVN QRDQLLRMVK GLNPKLVTLV  480
EQDVNTNTAP FLQRFAEAYS YYSAVFDSLE ATLPRDGQER MNVERQCLAR DIINIVACEG  540
EERIERYEVA GKWRARMMMA GFTSSPIGQN VKDEIRKLIK QYSERYKVKE ETGAVHFGWE  600
DKILIAASAW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein