PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027094086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 611aa MW: 68680 Da PI: 4.6095 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 445 | 5e-136 | 243 | 611 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 + L++cA a+++g++ +a++++++l++++s +g+p +R+aay++eAL ar+a s+++lykal+++e + ss++l+a+++++ev+P+++f+++t XP_027094086.1 243 QMLFDCAAAIQDGNFDEASTIINELRQRVSIQGEPPERIAAYMVEALVARMATSGKGLYKALKCKEPP---SSDRLSAMQVLFEVCPCFRFGFMT 334 79*****************************************************************9...9*********************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190 aN aIlea + e+rvHiiDfdi+qG Q+ +Llq+La+ p +p +lR+Tgv++pes+ l+ +g+ L+ fAe l++p+ f+ va +++d++ XP_027094086.1 335 ANGAILEACKDEKRVHIIDFDINQGSQYYTLLQTLAQLPYKPSHLRLTGVDDPESVqrAVGGLNIIGQMLETFAEDLKIPLTFHS-VAAKTADID 428 ******************************************************99878889***********************.7999***** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 +++L++kpgEal+Vn+++qlh+++desvs+ ++rd++L++vk+l+Pk+v++veq++++n+++Fl+rf+ea +yysa+fdslea+lpr+ +er++v XP_027094086.1 429 PSMLDCKPGEALIVNFAFQLHHMPDESVSTVNQRDQLLRMVKGLNPKLVTLVEQDVNTNTAPFLQRFAEAYSYYSAVFDSLEATLPRDGQERMNV 523 *********************************************************************************************** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 Er++l+r+i n+vaceg+er+er e ++kWr+r+++aGF++ p+++++ ++++ l+++++++ y+v+ee g++ +gW+d+ L+++SaWr XP_027094086.1 524 ERQCLARDIINIVACEGEERIERYEVAGKWRARMMMAGFTSSPIGQNVKDEIRKLIKQYSER-YKVKEETGAVHFGWEDKILIAASAWR 611 ************************************************************66.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 611 aa Download sequence |
MFARTSVETG TETLAAQSRR QFWTEEEIFY AQTSFLANEK SDMSLVKSAS SFRNRKLYSL 60 KDSRNNSGFS KAILEKQQGI TYSSESYSDG SYDPKYFLES PSEEFAHSSI SDVLGIRFDS 120 PHPSSNQLLA GQHSFSNSFM PAKQCDTYEF SFESEYLGAE DPDATDYDED EVRLKLQELE 180 RALFDDNNIV DNDLLETEHG WADSTENVLL HDSPKESSSS DSNLSSISSN KEISVTTPPG 240 PKQMLFDCAA AIQDGNFDEA STIINELRQR VSIQGEPPER IAAYMVEALV ARMATSGKGL 300 YKALKCKEPP SSDRLSAMQV LFEVCPCFRF GFMTANGAIL EACKDEKRVH IIDFDINQGS 360 QYYTLLQTLA QLPYKPSHLR LTGVDDPESV QRAVGGLNII GQMLETFAED LKIPLTFHSV 420 AAKTADIDPS MLDCKPGEAL IVNFAFQLHH MPDESVSTVN QRDQLLRMVK GLNPKLVTLV 480 EQDVNTNTAP FLQRFAEAYS YYSAVFDSLE ATLPRDGQER MNVERQCLAR DIINIVACEG 540 EERIERYEVA GKWRARMMMA GFTSSPIGQN VKDEIRKLIK QYSERYKVKE ETGAVHFGWE 600 DKILIAASAW R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |