PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093864.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 685aa    MW: 78176.9 Da    PI: 6.7508
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS245.32.4e-753106784374
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsel.ykalppsetsekn....sseelaalklfsevsPilkf 93 
                     lL ++Ae v++++  +a++lL      as++g+p+qR++ +f+eAL++++ +++     + l  +  ++ +    ++    a+ + ++ +P+  f
  XP_027093864.1 310 LLQAAAEKVANQQYVQARKLLILCGCFASKSGSPVQRVVYCFAEALEKKIEQEWGIApTEELVGKLRKPLDemlaQVYMQPAMMTSQQETPFTLF 404
                     678899*********************************************9764321222322222222222223444445566999******* PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     + +ta + Il+av++++rvH iDf+i++G++W  ++qaLa R e p  +l+i +vg     sk+ +eetg+ L++fAe+l++pf++++ v+++l+
  XP_027093864.1 405 TEFTATESILNAVASAKRVHLIDFQINNGAHWTLIMQALAVRYECPFeHLKISAVGT----SKKIMEETGKWLSSFAETLNLPFSYKM-VVSDLK 494
                     ******************************************966545*********....9**************************.7999** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ + ++++ +E la+ + ++l + l      +++ ++++ ++++l+P++vvv e ea++n+++F erf  al  +sa+fd++++ + ++   r
  XP_027093864.1 495 DLRENYFELEFDEELAIYSDMRLWTQL----VWPNHLKALMGVIRKLKPRIVVVKEFEANTNAPNFPERFDAALLLFSAMFDCINSCMDHHVLYR 585
                     *********************999998....45555667*************************************************9999*** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ E++++ r ++n++ +eg er++rhe+ + Wr+ + e+G+ +  l+ +  ++a+l lr  +     +v+ + ++l++gWk+ p  s+SaW+
  XP_027093864.1 586 KMTEEVIFPRMVQNIIVAEGMERFQRHEKIGFWRKLFAEFGMAETDLTRSSLCEASLFLRSSErLSSCTVDMDGKCLIMGWKGAPFQSLSAWK 678
                     ***************************************************************9888*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MDTSPANYAN SVPHISYLAE GKKESPFLPL TSLEFLKQHG TKLKRLREGN LNELSSDTLM  60
DTPDHPAQST ASPMKVAKVQ LRKFNSQKID VLSYVASRIG TMVQSRGRGR SRGLERSTSV  120
SAYPSRFRSE GDYFELEFDE ELAIFLALRL WTQQFEQRNL LQEGSFRALN RWLTEQIYIS  180
QSLFFTILSE KIKDTDTTLD ENSVPQIYYL DEGKKESPFL PLTSLEFLKQ HGTKLKRLRE  240
GNLNELSSDT PMDTSHHPAL STASLMKAAK AQLFKFNSQK IDVFCYVSSH IGTLSGLRSE  300
VPGDLELALL LQAAAEKVAN QQYVQARKLL ILCGCFASKS GSPVQRVVYC FAEALEKKIE  360
QEWGIAPTEE LVGKLRKPLD EMLAQVYMQP AMMTSQQETP FTLFTEFTAT ESILNAVASA  420
KRVHLIDFQI NNGAHWTLIM QALAVRYECP FEHLKISAVG TSKKIMEETG KWLSSFAETL  480
NLPFSYKMVV SDLKDLRENY FELEFDEELA IYSDMRLWTQ LVWPNHLKAL MGVIRKLKPR  540
IVVVKEFEAN TNAPNFPERF DAALLLFSAM FDCINSCMDH HVLYRKMTEE VIFPRMVQNI  600
IVAEGMERFQ RHEKIGFWRK LFAEFGMAET DLTRSSLCEA SLFLRSSERL SSCTVDMDGK  660
CLIMGWKGAP FQSLSAWKLQ NEYEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.12e-44GRAS family protein