PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093863.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 473aa    MW: 53799.5 Da    PI: 6.842
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS221.15.4e-681184724360
            GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsv..selykal.ppsetsekn..sseelaalklfsevsPilkf 93 
                     lL ++Ae v++++  +a++lL      as++g+p+qR++ +f+eAL++++ +++    + + + + ++  ++   ++    a+ + ++  P+  f
  XP_027093863.1 118 LLQAAAEKVANQQYVQARKLLILCGCFASKRGSPVQRVVYCFAEALEKKIEQEWgiAPTEELIgKLRKPLDEMlaQVYMQPAMMTSQQEKPFTLF 212
                     678899*********************************************97622223333322222222222244444455669999****** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     + +ta + Il+av++++rvH iDf+i++G++W  ++qaLa R e p  +l+i +vg     sk+ +eetg+ L++fAe+l++pf++++ v+++l+
  XP_027093863.1 213 TEFTATESILNAVASAKRVHLIDFQINNGAHWTLIMQALAVRYECPFeHLKISAVGT----SKKIMEETGKWLSSFAETLNLPFSYKM-VVSDLK 302
                     ******************************************966545*********....9**************************.7999** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ + ++++ +E la+ + ++l + l      +++ ++++ ++++l+P++vvv e ea++n+++F erf  al  +sa+fd++++ + ++   r
  XP_027093863.1 303 DLRENYFELEFDEELAIYSDMRLWTQL----VWPNHLKALMGVIRKLKPRIVVVKEFEANTNASNFPERFDAALLLFSAMFDCINSCMDHHVLYR 393
                     *********************999998....45555667*************************************************9999*** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360
                     ++ E++++ r ++n++ +eg er++r+e+ + Wr+ + e+G+ +  l+ +  ++a+l lr  +     +v+ + ++l++
  XP_027093863.1 394 KMTEEVIFPRMVQNIIVAEGMERFQRQEKIGFWRKLFAEFGMVETDLTRSSLCEASLFLRSSErLSSCTVDMDGKCLIM 472
                     ************************************************************9997777888888888876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    
MDTSPANYAN SVPHISYLAE GKKESPFLPL TSLEFLKQHG TKLKRLREGN LNELSSDTLM  60
DTPDHPALST ARLMKVAKVQ LLKFNSQKID VLSYVASRIG TQSGLHSEVP GDLELALLLQ  120
AAAEKVANQQ YVQARKLLIL CGCFASKRGS PVQRVVYCFA EALEKKIEQE WGIAPTEELI  180
GKLRKPLDEM LAQVYMQPAM MTSQQEKPFT LFTEFTATES ILNAVASAKR VHLIDFQINN  240
GAHWTLIMQA LAVRYECPFE HLKISAVGTS KKIMEETGKW LSSFAETLNL PFSYKMVVSD  300
LKDLRENYFE LEFDEELAIY SDMRLWTQLV WPNHLKALMG VIRKLKPRIV VVKEFEANTN  360
ASNFPERFDA ALLLFSAMFD CINSCMDHHV LYRKMTEEVI FPRMVQNIIV AEGMERFQRQ  420
EKIGFWRKLF AEFGMVETDL TRSSLCEASL FLRSSERLSS CTVDMDGKCL IMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.18e-39GRAS family protein