PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027093290.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 377aa MW: 42453.8 Da PI: 8.001

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027093290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.3	3.7e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++ XP_027093290.1 25 FLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_027093290.1 111 IHRRKTA 117 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ 120 VAINHHHHHH PLNNPISSPT FFPYPNRVSI SPPDSDDQPS HWCDSPPISS SPVGISVINR 180 NANPAGGNNY SNSISSSSVT ALSEDNERLR RSNNMLMSEL AHMRKLYNDI IYFVQNHVKP 240 VAPSNTFPSS LLPSSATPII HNTTNSSSSL MQKPLNQLIG FHHHHYPKQN GPPHHQANIS 300 FNNSSPPSKT SHGSSVTIVE EPMESSNICR TKLFGVPLHS KKRLHPECSN SMVETNKARL 360 VMEKDDLGLN LMPPSPC

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ  120
VAINHHHHHH PLNNPISSPT FFPYPNRVSI SPPDSDDQPS HWCDSPPISS SPVGISVINR  180
NANPAGGNNY SNSISSSSVT ALSEDNERLR RSNNMLMSEL AHMRKLYNDI IYFVQNHVKP  240
VAPSNTFPSS LLPSSATPII HNTTNSSSSL MQKPLNQLIG FHHHHYPKQN GPPHHQANIS  300
FNNSSPPSKT SHGSSVTIVE EPMESSNICR TKLFGVPLHS KKRLHPECSN SMVETNKARL  360
VMEKDDLGLN LMPPSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-106	HSF family protein