PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093174.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 148aa    MW: 16757.7 Da    PI: 8.4742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.6e-172473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_027093174.1 24 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 73
                    69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MEGGCCSSTE KRKERENHHQ QEKPYRGIRM RKWGKWVAEI REPNKRSRIW LGSYSSPVAA  60
ARAYDTAVFY LRGPSARLNF PECIVEDDEL HDLSAAAIRK RATEVGARVD ALQQTAVHAS  120
STKSNSTPPR LEKPDLNEYP SPETSDDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.17e-54ERF family protein