PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027093044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 302aa MW: 34217.2 Da PI: 7.7941 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.6 | 4e-12 | 127 | 173 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ + f L +l+P + kKl+Ka++Le A ++Ik+Lq XP_027093044.1 127 YHVQAERKRREKLSDLFIALSKLVPGL-----KKLDKASVLEDANKHIKELQ 173 6899***********************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MDMASFNNQF VTNSMQDHQV DDGFFDIKPF LSEVFPAISY CNSDSIPIQM PQTCMKQKFK 60 QLNDTNLSPS HPTVESNLKG SSPFSNTQLI SFGKSSPYSS DGEKSYEDEI VYNSRIPIRR 120 TPIQAQYHVQ AERKRREKLS DLFIALSKLV PGLKKLDKAS VLEDANKHIK ELQERLKTLE 180 EEKKNNSKAP EIMVERCIIS TCSGNTSSFK GATLELIPEI KVKIQGKNVL VKILCEKKYQ 240 GSISSMSSEL EKLHLTILDS RILRFGCCTL DITLKAQVDN EFSVTMKDII EHLQQGIFQL 300 HS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 137 | ERKRRE |
2 | 133 | 138 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 5e-43 | bHLH family protein |