PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027092449.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 362aa    MW: 39555.6 Da    PI: 10.0187
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027092449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.2e-31290347359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  XP_027092449.1 290 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYEGEHNHS 347
                     99************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MAVELMTGFR NDTFASKMEE NAVQEAATAG LQSVEKLIRL LSQSQSQPSQ IYQDPSSKQS  60
SDYQAVADAA VNKFKKFISL LDRTRTGHAR FRRGPVTNPP QPAPPLPPTQ QPEQPQPQRQ  120
PPQSNPAATS QPANNLFQED DKEKVKSSSR IYCPTPIQGL PPLPHNHHQL MKNVNIERKE  180
STTTINFAAA SPVNSFMSSL TGDTESLQPS MSSGFQITNL SSHVSSAGKP PLSTSSLKRK  240
CSSMDDSAVK CGGAASSGGR CHCPKKRKSR VKRVVRVPAI SMKMADIPPD DYSWRKYGQK  300
PIKGSPHPRG YYKCSSLRGC PARKHVERAL DDPTMLIVTY EGEHNHSHSA TEAPGALVLE  360
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-89WRKY family protein