PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091217.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 461aa MW: 51456.6 Da PI: 6.4524

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.2	7.9e-10	388	425	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV++WF N R + XP_027091217.1 388 FEHflHPYPNDSEKLTLASQTGLSKNQVSNWFINARVR 425 664459******************************88 PP
2	BELL	104.4	7.8e-34	250	321	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elq+k kL+ lleeV++rY+qy++ + ++ssFe++aglg+ k+Yt+lAl+a+SrhF cL++ai +qi XP_027091217.1 250 EKHELQAKLLKLIALLEEVERRYEQYYHHMDELVSSFEMIAGLGAGKSYTALALQAMSRHFCCLREAILSQI 321 689*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MVSQDSPSNP NTSILHQFII SNSIASQNQF GGEHFDAYAN GLSGGSTYDS LGSTPSLQCF 60 GERIPRSIDI VNAPQLTDES DVNHPRHLMD LLGASNEANY HAQRLSLSLG TRTLVSPVAG 120 RQRTLTSTLV DPGYIISGDN AREACNPRGD SINSSYSFGG SVFAASSTSP NHQSSCISYG 180 TEALAVAISN SKYLRPAQWL LDEVVKVGSK AIDLSNEKYA RRLSSSSKRG SLKLRSEINL 240 EFTNNEVFTE KHELQAKLLK LIALLEEVER RYEQYYHHMD ELVSSFEMIA GLGAGKSYTA 300 LALQAMSRHF CCLREAILSQ IYVTKRKISE DMPKISSDMS QLSLFDQENR HSRLSLQQLS 360 MIQSSRQAWR PIRGLPETSV AILRSWLFEH FLHPYPNDSE KLTLASQTGL SKNQVSNWFI 420 NARVRLWKPM IEEMYKEEFA ESYVESNPSI SREGFADSAE D

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MVSQDSPSNP NTSILHQFII SNSIASQNQF GGEHFDAYAN GLSGGSTYDS LGSTPSLQCF  60
GERIPRSIDI VNAPQLTDES DVNHPRHLMD LLGASNEANY HAQRLSLSLG TRTLVSPVAG  120
RQRTLTSTLV DPGYIISGDN AREACNPRGD SINSSYSFGG SVFAASSTSP NHQSSCISYG  180
TEALAVAISN SKYLRPAQWL LDEVVKVGSK AIDLSNEKYA RRLSSSSKRG SLKLRSEINL  240
EFTNNEVFTE KHELQAKLLK LIALLEEVER RYEQYYHHMD ELVSSFEMIA GLGAGKSYTA  300
LALQAMSRHF CCLREAILSQ IYVTKRKISE DMPKISSDMS QLSLFDQENR HSRLSLQQLS  360
MIQSSRQAWR PIRGLPETSV AILRSWLFEH FLHPYPNDSE KLTLASQTGL SKNQVSNWFI  420
NARVRLWKPM IEEMYKEEFA ESYVESNPSI SREGFADSAE D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	6e-77	TALE family protein