PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027091182.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

BES1

Protein Properties

Length: 333aa MW: 35459.8 Da PI: 9.2154

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027091182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	206.6	6.8e-64	37	166	3	133
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqss 97 ++rkp+w+ErEnn+rRERrRRaiaakiyaGLRaqGny+lpk++DnneVlkALc+eAGw+ve DGttyrkg++p+ e++ +sa+++p+ss + s XP_027091182.1 37 GRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYNLPKHCDNNEVLKALCAEAGWIVESDGTTYRKGCRPP-PIEIGSTSANITPSSSRNPS 130 79**********************************************************************.9*************** PP DUF822 98 lkssalaspvesysaspksssfpspssldsislasa 133 + ss++asp++sy++sp sss psp++ + ++++++ XP_027091182.1 131 PPSSYFASPIPSYQPSPLSSSCPSPTRQEPNMASHP 166 *************************999987654 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MMWEAGGSTA SSSAAGGSGG GGGGGGEGGG SGGVVNGRRK PSWRERENNR RRERRRRAIA 60 AKIYAGLRAQ GNYNLPKHCD NNEVLKALCA EAGWIVESDG TTYRKGCRPP PIEIGSTSAN 120 ITPSSSRNPS PPSSYFASPI PSYQPSPLSS SCPSPTRQEP NMASHPFAFL RNSIPSSLPP 180 LRISNSAPVT PPLSSPTRLP KQIFNLEALA KESMNALNIP FFAASAPASP TRGQRFTPAT 240 IPECDESDSS TIDSGQWMNF QTYAPNMVPT SPTFNLMKPM AQPVSPMDVV SGKGKGIEFD 300 FEKLPVKAWE GERIHEVGLD DLELTLGSGN ARI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	38	57	RRKPSWRERENNRRRERRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	4e-84	BES1 family protein