PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027090795.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 954aa MW: 105593 Da PI: 6.8793

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027090795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.1e-29	604	655	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l++yF++++kdAA+++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_027090795.1 604 AEKTITLQMLRQYFAGSLKDAARNIGVCPTTLKRICRQHGIKRWPSRKIKKV 655 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
IWICIHSEYH LGSSGSDSLI DLDCMDELLL EGCWLETTEG XELLSDGPSD FNALFDASFT 60 WPILEAINGE SNPLKSTEEE RQRLSFSENL SASPSQXRNS AKSESQDGNA VCSPSLSGNF 120 SAESSALSRR LWIGPRASTS VMDRLIKALG YMKDWAGDKN ALIQIWVPVN KGGRRVLTTN 180 DQPFSLDLNC PRLASYRNVS VNYQFSTEED LKESVGLPGR VFMGRVPEWT PDVQFFRXDE 240 YPRVGHAQQY DVRGTLAVPI FEQGSRNCLG VIEVVLTTQK INYRPELESV CRALQAVNLR 300 SSDVSGAQNS KACDFSYQSA LPEIQEILRA ACGTYSLPLA QTWVPCIKQG XGGCRHSDEN 360 LVRCVSTVDS ACYIADXHVQ GFSDACSEHH LLKGQGIVGR AFTTNQPCFS PDITTFTKTD 420 YPLSHHARIF GLCAAVAIRL RSIYSGSTDF GLEFFLPVDC KDAEEHQKML SSLSLIIQKF 480 CRGLRVITDK ELLEENSVPS GGVSIPSYIK FGEEMSKTEH RHSAMASQRS FWTSRHAEVE 540 ETAVVASIQN AKPVEMLSGK FSAARQSLPD ISSRKERMCG DSLTRGQCSL LDVSKTAEKR 600 GAKAEKTITL QMLRQYFAGS LKDAARNIGV CPTTLKRICR QHGIKRWPSR KIKKVGHSLQ 660 KIQRVIDSVQ GASGSLQIES FYTNFPELAS PNLTTAAPFS CFNSSDHPIS LNTQPEASTL 720 SPHASASKSP SSSCSHSSSS SQCCSTGTQP HPHTLKISGQ EDLVKNNSTG FMLKRVRSDA 780 QLDLSSDGPK FLPRSHSHVS FTEHPDPENL PPAPKETSWM SREGTTLRIK VTYGEEKIRF 840 RMLNNWGYRD LLREVSGRFG VDDTTGFQLK YMDDDSEWIL LTCDADLEEC LDICRSSQSQ 900 TVKLSFLCAS HPLHGSPSGS RSCDKVEKYL AGINVQIASC FRCAYFHPLV ELRI

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

IWICIHSEYH LGSSGSDSLI DLDCMDELLL EGCWLETTEG XELLSDGPSD FNALFDASFT  60
WPILEAINGE SNPLKSTEEE RQRLSFSENL SASPSQXRNS AKSESQDGNA VCSPSLSGNF  120
SAESSALSRR LWIGPRASTS VMDRLIKALG YMKDWAGDKN ALIQIWVPVN KGGRRVLTTN  180
DQPFSLDLNC PRLASYRNVS VNYQFSTEED LKESVGLPGR VFMGRVPEWT PDVQFFRXDE  240
YPRVGHAQQY DVRGTLAVPI FEQGSRNCLG VIEVVLTTQK INYRPELESV CRALQAVNLR  300
SSDVSGAQNS KACDFSYQSA LPEIQEILRA ACGTYSLPLA QTWVPCIKQG XGGCRHSDEN  360
LVRCVSTVDS ACYIADXHVQ GFSDACSEHH LLKGQGIVGR AFTTNQPCFS PDITTFTKTD  420
YPLSHHARIF GLCAAVAIRL RSIYSGSTDF GLEFFLPVDC KDAEEHQKML SSLSLIIQKF  480
CRGLRVITDK ELLEENSVPS GGVSIPSYIK FGEEMSKTEH RHSAMASQRS FWTSRHAEVE  540
ETAVVASIQN AKPVEMLSGK FSAARQSLPD ISSRKERMCG DSLTRGQCSL LDVSKTAEKR  600
GAKAEKTITL QMLRQYFAGS LKDAARNIGV CPTTLKRICR QHGIKRWPSR KIKKVGHSLQ  660
KIQRVIDSVQ GASGSLQIES FYTNFPELAS PNLTTAAPFS CFNSSDHPIS LNTQPEASTL  720
SPHASASKSP SSSCSHSSSS SQCCSTGTQP HPHTLKISGQ EDLVKNNSTG FMLKRVRSDA  780
QLDLSSDGPK FLPRSHSHVS FTEHPDPENL PPAPKETSWM SREGTTLRIK VTYGEEKIRF  840
RMLNNWGYRD LLREVSGRFG VDDTTGFQLK YMDDDSEWIL LTCDADLEEC LDICRSSQSQ  900
TVKLSFLCAS HPLHGSPSGS RSCDKVEKYL AGINVQIASC FRCAYFHPLV ELRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein