PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027090471.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 673aa MW: 77927.4 Da PI: 7.8039 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72 | 1.4e-22 | 26 | 113 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsv+k++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027090471.1 26 KFYNKYAFKMGFSVCKDYLNKD-KDGVTTSRRYSCCKEGVKRKYECD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYCVHDLVLEHNHEL 113 6*****************9998.8999****************9999.999*******************999****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 673 aa Download sequence |
MDCSKLAENR TPELGMKFNS EEDAYKFYNK YAFKMGFSVC KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEC DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY CVHDLVLEHN HELHIAQYAH 120 MMPSQRKVSV AQGFQAEISE DAGLSLKQSH DLMGTEAGGM GNVGYTRDDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ HRQIVIFDAA LMYDETIDSF KCVFGTFLEA MCGKHPNTIL 300 TDQDHAMAAA LSIVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPIVFV 480 AFQNEYGEST AMVMLRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRY SCKKYENEGI 540 LCGHALKVFD TVGIKIIPPE YIKRRWTKRV RAGDCFDRRG QEVVADPKVM ISTRYRELAP 600 AMIKIATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN 660 EMGEAVVARG TKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-104 | FAR1 family protein |