PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027089877.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 220aa MW: 24898.9 Da PI: 6.5911

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027089877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.6e-31	136	194	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk++++pr+YY+C+++gC+vkk+ver+aedp+++++tYeg+Hnhe XP_027089877.1 136 LDDGFKWRKYGKKKVKSNPNPRNYYKCSTEGCKVKKRVERDAEDPSYLVTTYEGRHNHE 194 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MFNSTFLPPP EPGISIHHDT VIPSTYTSDY LLDKYFTDHL GSQELSHYLD IPDHGQLLIN 60 NVHEDSNSSL TACVHPTLFT QEMTSTTGSS ASCMDGMPIN SYMEEDQSSC KRVMKRAKVD 120 QGNVIAIRTK TQLEILDDGF KWRKYGKKKV KSNPNPRNYY KCSTEGCKVK KRVERDAEDP 180 SYLVTTYEGR HNHEGPCFIY CDALPLAISY GWTLQPSQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	4e-39	WRKY family protein