PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027088857.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 824aa    MW: 94519.1 Da    PI: 7.6925
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027088857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.59.4e-2862149191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e++     ++r+ ++++t+Cka+++vk++kdgkw+++++ +eHnHel p
  XP_027088857.1  62 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGITPESDGG---SSRRPSVKKTDCKASMHVKRKKDGKWYIHEFLKEHNHELLP 149
                     5****************************************999888...7788889*******************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 824 aa     Download sequence    
MVDSSENAIQ VTAHMVDVAD QASHRDVGIA HSTAKDITGF GGVTEFEPHD GIEFESHEAA  60
YSFYQEYAKS MGFTTSIKNS RRSKKSKEFI DAKFACSRYG ITPESDGGSS RRPSVKKTDC  120
KASMHVKRKK DGKWYIHEFL KEHNHELLPA LAYHFRIHRN VKLAEKNNID ILHAVSERTR  180
KMYVQMSRQS GGSPEIGFLR SGSDSQLDRG RSLVVEEGDS QLMVEYFMHL QRENPYFFYA  240
IDVNEDQRLR NLFWVDAKSR KDYRSFNDVI VFDTSYMKGN EKMPFAPFVG VNHHFQPMLL  300
GCGLLADETV STFLWLMKTW HKAMGGQAPK VIITDQDKAL KVAVEEVLPN SRHCFALWHI  360
MERLPDTLSH TIKQHESFTR KFSKCVFKSL TDEQFDMKWW KMVGRFELHE NEWIHSLYED  420
RKKWVPAFLR DAFLAGMSTI QRSESLISFF DKYIHKKISL KEFIRQYGTI LQNRYEEEAI  480
ADFDTWHKQP ALKSPSPWEK QMSTIYTHAI FKKFQVEVLG VVGCHPKKES ENGSDVTFRV  540
DDCEKGEDFT VMWNEATSEV SCSCLMFEFK GFLCRHAMIV LQMCGLSSIP FRYILKRWTK  600
DVKNRQTVVD GTERILTRVQ RYNDLCRRAI ELGEEGSLSE ERYNIAFHAL VEGLKNCVDV  660
NNKTGTEYSS NPIVLRGAQE EKHGVLSTKE SKKKISNKKR KVQSDSEVAT LQVEGSLQPM  720
ENLSSDAMTI NGYYGSQQNV QGLLQIQLNL MEPPHDAYYV NQQNMQGLGQ LNSIAPSQDG  780
FFGTQQNMHG LGNLDFRPPS FTYGLQDDSH VRSGQLPGGS AKHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.10.0FAR1 family protein