PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027088629.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 592aa MW: 68151.1 Da PI: 7.1933

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027088629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.3e-20	86	176	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF + ks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027088629.1 86 EFYNLYAKLSGFGIHKSNAKRD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 176 6*************998887.8998999********9988867889999************98899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MGQDGALKTH DMVQETENGK MGMDGCGKLR SFDLNQEPEC DRDTFIEESG SLIGGHEDEE 60 ADELVGAIGV DDVMKLTFDT EEEIGEFYNL YAKLSGFGIH KSNAKRDADG ISRFRKWVCC 120 CEGYRNEKWF NYEDRKREAK PITRTGCGAC FRVKYDIESV KYVVTRFIME HNHPLASEAS 180 VQHIRSHRKV SDAEYAQAKS LKLVGARICQ IMKHFVIKAG GYSNVGFCIK DLYNRMDEER 240 KKNIFNGDAE GALGFLAVKK DADDMFFYKY HVDNEGRLAR LFWANSKSRA DFSVFGDVLV 300 FDTTYKTNKY RKPLVVLAGV NNHLNSIIFG CALLSDERIE TYELVLSTFV EAMKGKKPVA 360 VMTDGDSAMR RAIKNLLPDA CHRLCSWHLH RNARSNIRCE EFNNRLYNLM ARKCSTLEFE 420 NRWARIVNEC GVVENEWVKK LYPRRRLCAE TYLSGHFFAD EQLTQMARYG TLKSSCNTMC 480 YYASYMDDAF NDLQQMFDKH SVDLKEKWID RGYGGDGFAM DSRVRNDRSR RTFGLLDLRV 540 SRSKEVERDG MVVHGSSSRD DRQVTEQHRL EGLSFVMYRW GEEYSRLLGL DG

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MGQDGALKTH DMVQETENGK MGMDGCGKLR SFDLNQEPEC DRDTFIEESG SLIGGHEDEE  60
ADELVGAIGV DDVMKLTFDT EEEIGEFYNL YAKLSGFGIH KSNAKRDADG ISRFRKWVCC  120
CEGYRNEKWF NYEDRKREAK PITRTGCGAC FRVKYDIESV KYVVTRFIME HNHPLASEAS  180
VQHIRSHRKV SDAEYAQAKS LKLVGARICQ IMKHFVIKAG GYSNVGFCIK DLYNRMDEER  240
KKNIFNGDAE GALGFLAVKK DADDMFFYKY HVDNEGRLAR LFWANSKSRA DFSVFGDVLV  300
FDTTYKTNKY RKPLVVLAGV NNHLNSIIFG CALLSDERIE TYELVLSTFV EAMKGKKPVA  360
VMTDGDSAMR RAIKNLLPDA CHRLCSWHLH RNARSNIRCE EFNNRLYNLM ARKCSTLEFE  420
NRWARIVNEC GVVENEWVKK LYPRRRLCAE TYLSGHFFAD EQLTQMARYG TLKSSCNTMC  480
YYASYMDDAF NDLQQMFDKH SVDLKEKWID RGYGGDGFAM DSRVRNDRSR RTFGLLDLRV  540
SRSKEVERDG MVVHGSSSRD DRQVTEQHRL EGLSFVMYRW GEEYSRLLGL DG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-67	FAR1 family protein