PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027088497.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 130aa    MW: 14909 Da    PI: 5.2893
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027088497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM422.9e-1361252109
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk..vePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p GfrF+P++eel+   L  kv+++  e+ ++ike  +y+  +ePwd                k +++++ +y F+k  + +a  k++ r+t  g
  XP_027088497.1   6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHIKEKILYSdgAEPWDVLGdndvrwqfyddseKGASTKRMVYVFAKLTRLSA--KKAGRTTGLG 96 
                     89************.88999999988777.8899988876336****963357788777765432334446688888888765..589999**** PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfy 109
                     +W    k+ +v +  +ge++g +++L + 
  XP_027088497.1  97 TWDGETKSYPVEDMsTGEKIGSRRMLSYV 125
                     *******9*9998778999*******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MADIIPIGFR FRPSEEELIS LLWLKVTNQL DETDHIKEKI LYSDGAEPWD VLGDNDVRWQ  60
FYDDSEKGAS TKRMVYVFAK LTRLSAKKAG RTTGLGTWDG ETKSYPVEDM STGEKIGSRR  120
MLSYVRILVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.13e-08NAC family protein