PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027088291.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 353aa MW: 39813.3 Da PI: 6.7528

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027088291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.8	3.9e-31	69	122	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+e+AtPk++l+lm+ kgL ++hvkSHLQ+YR+ XP_027088291.1 69 PRLRWTPDLHLRFLHAVERLGGQERATPKSVLQLMNTKGLNITHVKSHLQMYRS 122 8****************************************************7 PP
2	Myb_DNA-binding	50.9	3.6e-16	70	121	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++++av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_027088291.1 70 RLRWTPDLHLRFLHAVERLGGQeraTPKSVLQLMNtKGLNITHVKSHLQMYR 121 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEGSGDAECS KTCPSSGETE ADEDENEDEG KIDDDHKQKD GGTSSNSSTV EENEINKPPV 60 RPYVRSKMPR LRWTPDLHLR FLHAVERLGG QERATPKSVL QLMNTKGLNI THVKSHLQMY 120 RSKKIDDPSQ GITDHRQVFE GVDPNIFNLS QIPMFPGFHH NHKSTFRYGE ATWDRLATLM 180 QISTMRQNMI NKIRPGFYDI WTGRNIGSRS SEVYSRILNS NQLSSWHTDE LQSTMQSFHD 240 QQEYQQDRLK SSKQVQSKTV YFSSGRSKIL GVEEGMILEK RAGVKRKASN CNVHLNLSLG 300 LGPVRDGYHE GLEDDDGHLS LSLCSPSSSK IRRLIDDTST ENACGASTLD LTL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEGSGDAECS KTCPSSGETE ADEDENEDEG KIDDDHKQKD GGTSSNSSTV EENEINKPPV  60
RPYVRSKMPR LRWTPDLHLR FLHAVERLGG QERATPKSVL QLMNTKGLNI THVKSHLQMY  120
RSKKIDDPSQ GITDHRQVFE GVDPNIFNLS QIPMFPGFHH NHKSTFRYGE ATWDRLATLM  180
QISTMRQNMI NKIRPGFYDI WTGRNIGSRS SEVYSRILNS NQLSSWHTDE LQSTMQSFHD  240
QQEYQQDRLK SSKQVQSKTV YFSSGRSKIL GVEEGMILEK RAGVKRKASN CNVHLNLSLG  300
LGPVRDGYHE GLEDDDGHLS LSLCSPSSSK IRRLIDDTST ENACGASTLD LTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-56	G2-like family protein