PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027087886.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 572aa    MW: 61737.9 Da    PI: 6.7504
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027087886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30310368259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  XP_027087886.1 310 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTVLITTYEGTHNHP 368
                     7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MDKGWGVTVD NSDKIGFFGN KPVFGFNLSP RLNPSKGSLS MFPAAEFLAN QNRREDSHAA  60
ASSDGEKRVV VGEVDFFSDK KKANDILIKK EDCHGEDKMK TNMDVVNTGL QLVIANTGSD  120
QSTVDDGVSS DIEDKRAKLE LAQLQVELEG MNAENRRLRE MLSQVSNNYT ALQMHLMTLT  180
HQQQQNAKPQ TTQDHEIGER KSEENKPENG GVVVPRQFLD LGPSGTAEMD EPTNSSSEER  240
TLSGSPHNNM ELSRNKGVGR EESPESQGWA PNKVAKLNAS SKTVDHAQAE ATMRKARVSV  300
RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAVG CPVRKQVQRC AEDRTVLITT  360
YEGTHNHPLP PAAMAMASTT SAAANMLLSG SMSSADGLMN PNFLARTILP CSSNMATISA  420
SAPFPTVTLD LTQTPNPLQF QRQPSTPFQL PFGTPPQNFP PVANPQMHQV FGQALYNQSK  480
FSGLQVSQDI EAAGAAAQMQ NQGQHPQVQQ GQHHPSFADT LSAATAAITA DPNFTAALAA  540
AISSIIGGSH PSSSNNSNPT TSTPPTANFP GN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-136WRKY family protein