PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027087886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 572aa MW: 61737.9 Da PI: 6.7504 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.4 | 2e-30 | 310 | 368 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ XP_027087886.1 310 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTVLITTYEGTHNHP 368 7*********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 572 aa Download sequence |
MDKGWGVTVD NSDKIGFFGN KPVFGFNLSP RLNPSKGSLS MFPAAEFLAN QNRREDSHAA 60 ASSDGEKRVV VGEVDFFSDK KKANDILIKK EDCHGEDKMK TNMDVVNTGL QLVIANTGSD 120 QSTVDDGVSS DIEDKRAKLE LAQLQVELEG MNAENRRLRE MLSQVSNNYT ALQMHLMTLT 180 HQQQQNAKPQ TTQDHEIGER KSEENKPENG GVVVPRQFLD LGPSGTAEMD EPTNSSSEER 240 TLSGSPHNNM ELSRNKGVGR EESPESQGWA PNKVAKLNAS SKTVDHAQAE ATMRKARVSV 300 RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAVG CPVRKQVQRC AEDRTVLITT 360 YEGTHNHPLP PAAMAMASTT SAAANMLLSG SMSSADGLMN PNFLARTILP CSSNMATISA 420 SAPFPTVTLD LTQTPNPLQF QRQPSTPFQL PFGTPPQNFP PVANPQMHQV FGQALYNQSK 480 FSGLQVSQDI EAAGAAAQMQ NQGQHPQVQQ GQHHPSFADT LSAATAAITA DPNFTAALAA 540 AISSIIGGSH PSSSNNSNPT TSTPPTANFP GN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-136 | WRKY family protein |