PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027087794.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 486aa    MW: 53046.7 Da    PI: 5.2423
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027087794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.2e-31249307259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_027087794.1 249 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 307
                     699************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MCSRLLQKME NYQGDLADIL RASGGRSIAS SNISSAEVSV SAPRDWQFPS NQVGIYEEPS  60
LDEFGDPFTN MRDPLLLPDM DHMPTSGFYD ASSTDHIITS GTTTAAENTG GFSCSDVGGG  120
GGVGGCNNSS SLLTQRILDD HELSRRPPNN IFTRMLQISP NAKPPSSPRE SQLLVAPSPR  180
GLKPPTLVTN DMINTSNNSK VSVIENAPVQ ISSPRNTGIK RRKSQAKKVV CIPAPAPANS  240
RPSGEIVPSD LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY  300
TSEHNHPWPT QRNALAGSTR SQPTKSGSTS KATNSSHAQK ATNLKEEEKP ETQTDNASSP  360
IVTGSSSTGQ VVKEETEMEM EVEGLDKKME MDNLDQFNEG FPQSYKPGLP DSNHSEDFFA  420
DLSELEADPL NLLFTQGYSG DEERENKNLE LFSFYDWTTN NSSMTTTTIM TTTTITSSLE  480
EAKKGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.17e-82WRKY family protein