PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027087611.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 784aa MW: 86420.5 Da PI: 6.2453

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027087611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.7e-31	297	354	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK+vkgse+prsYY+C ++Cpvkkkvers+ d++++ei+Y+g Hnh+k XP_027087611.1 297 EDGYSWRKYGQKHVKGSEYPRSYYKCNNSNCPVKKKVERSH-DGEITEIIYKGAHNHPK 354 8**************************************.*************85 PP
2	WRKY	105.8	2.3e-33	517	575	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++d k v +tYeg+Hnhe XP_027087611.1 517 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASDDIKSVLTTYEGKHNHE 575 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
MEVNGETFND WGALVVVDEF ESKPGEDYGE TERNNIGDIC TNGVNGASDN SSININNNEN 60 GNNDVHLDDQ SKKSSSSSSP EVEFRGSIAE RRAAKFGFDA SRINVAKFEV STSPSSPLVR 120 SPYLTIPSGL SPAALLDSPV MLPNSQPSPT TGTLQLLHSN HDSSVLNSDS PAADRDKGSA 180 IHTSNPFKPP ADPTPIISGP LSSENQLPMT SKSPPESRIE ASVKSCALER SIKTNIFKTM 240 PQKANHVNSQ TPNISVVNNQ LPHLREGIKS ETGIQELHRE DQKGTYPGAA EMSRNAEDGY 300 SWRKYGQKHV KGSEYPRSYY KCNNSNCPVK KKVERSHDGE ITEIIYKGAH NHPKPHPRIS 360 LGPPSQSSEM LETSEGSEPG LKAENRTGWR FNNQLIRSKD FRITSDWRPN GMERTSSTSV 420 LTEILDPLAT TQGKSAKAFG STETPEIALT AAYQDGEDDD RATQGSTSQG DEADADESEP 480 KRRQVIFYFC TLQSYLPSRS TREPRVIVQI ESEIDVLDDG YRWRKYGQKV VKGNPNPRSY 540 YKCTSAGCPV RKHVERASDD IKSVLTTYEG KHNHEVPTNK TSGLPSASNS PPDVSDPNSS 600 LIVPRNPSIS NRELQVQDLP LHYEMKPALG NHDFLRSNLL GDFVTDHMQI GASSIYQMKF 660 PPTPLQNPLS YSTFLMNSSG SDSRVSCQKF PPVVPDFPMS IPINVPRSSP NMALNNAFHS 720 FNHNQTIPNA TAVRCQHITE GDLRFLRPKE EKEDNLYETC LATPDNSNVT SSTEFCRSNG 780 NFPS

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

MEVNGETFND WGALVVVDEF ESKPGEDYGE TERNNIGDIC TNGVNGASDN SSININNNEN  60
GNNDVHLDDQ SKKSSSSSSP EVEFRGSIAE RRAAKFGFDA SRINVAKFEV STSPSSPLVR  120
SPYLTIPSGL SPAALLDSPV MLPNSQPSPT TGTLQLLHSN HDSSVLNSDS PAADRDKGSA  180
IHTSNPFKPP ADPTPIISGP LSSENQLPMT SKSPPESRIE ASVKSCALER SIKTNIFKTM  240
PQKANHVNSQ TPNISVVNNQ LPHLREGIKS ETGIQELHRE DQKGTYPGAA EMSRNAEDGY  300
SWRKYGQKHV KGSEYPRSYY KCNNSNCPVK KKVERSHDGE ITEIIYKGAH NHPKPHPRIS  360
LGPPSQSSEM LETSEGSEPG LKAENRTGWR FNNQLIRSKD FRITSDWRPN GMERTSSTSV  420
LTEILDPLAT TQGKSAKAFG STETPEIALT AAYQDGEDDD RATQGSTSQG DEADADESEP  480
KRRQVIFYFC TLQSYLPSRS TREPRVIVQI ESEIDVLDDG YRWRKYGQKV VKGNPNPRSY  540
YKCTSAGCPV RKHVERASDD IKSVLTTYEG KHNHEVPTNK TSGLPSASNS PPDVSDPNSS  600
LIVPRNPSIS NRELQVQDLP LHYEMKPALG NHDFLRSNLL GDFVTDHMQI GASSIYQMKF  660
PPTPLQNPLS YSTFLMNSSG SDSRVSCQKF PPVVPDFPMS IPINVPRSSP NMALNNAFHS  720
FNHNQTIPNA TAVRCQHITE GDLRFLRPKE EKEDNLYETC LATPDNSNVT SSTEFCRSNG  780
NFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	1e-75	WRKY family protein