PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027086327.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 286aa MW: 31213.7 Da PI: 8.0749

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027086327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104	9.1e-33	52	106	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl XP_027086327.1 52 KPRLRWTADLHDRFVDAVAQLGGPTKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 106 79****************************************************8 PP
2	Myb_DNA-binding	68	1.6e-21	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav+qlGg+ t+k+I+rtmg kg+tl ++ks++qky+ XP_027086327.1 54 RLRWTADLHDRFVDAVAQLGGPtkaTPKAIMRTMGvKGLTLFHLKSHLQKYR 105 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MLPRLIQPRE GVIIQEEHIN NSSSNRTTAG VGIGAIGVGV GDPCLVLTSD PKPRLRWTAD 60 LHDRFVDAVA QLGGPTKATP KAIMRTMGVK GLTLFHLKSH LQKYRLGLAA AYLLESPHAN 120 KSPQSLPDSD MNEGYEVKEA LRVQMEVQSK LHLQVEAEKH LLIRQDAEQR YMAMLERACK 180 MLAEQIVGCT IRGPDREDYQ GLGTKTQIGA SHNAYGLQPS ESAEVRRIHS PEEVIRQIKQ 240 CADCSTESCL TSRDNPAGLC PGGSPSPGGK KRFLSMDSAS ASFIYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	5e-59	G2-like family protein