PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027086326.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 300aa MW: 32657.2 Da PI: 8.0737

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027086326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	9.8e-33	52	106	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl XP_027086326.1 52 KPRLRWTADLHDRFVDAVAQLGGPTKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 106 79****************************************************8 PP
2	Myb_DNA-binding	67.9	1.7e-21	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav+qlGg+ t+k+I+rtmg kg+tl ++ks++qky+ XP_027086326.1 54 RLRWTADLHDRFVDAVAQLGGPtkaTPKAIMRTMGvKGLTLFHLKSHLQKYR 105 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MLPRLIQPRE GVIIQEEHIN NSSSNRTTAG VGIGAIGVGV GDPCLVLTSD PKPRLRWTAD 60 LHDRFVDAVA QLGGPTKATP KAIMRTMGVK GLTLFHLKSH LQKYRLGKQS GKDLVEASKD 120 GLAAAYLLES PHANKSPQSL PDSDMNEGYE VKEALRVQME VQSKLHLQVE AEKHLLIRQD 180 AEQRYMAMLE RACKMLAEQI VGCTIRGPDR EDYQGLGTKT QIGASHNAYG LQPSESAEVR 240 RIHSPEEVIR QIKQCADCST ESCLTSRDNP AGLCPGGSPS PGGKKRFLSM DSASASFIYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	5e-66	G2-like family protein