PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027085706.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 573aa    MW: 62012.3 Da    PI: 6.9479
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027085706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32e-30310368259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
  XP_027085706.1 310 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTVLITTYEGTHNHP 368
                     7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MDKGWGVTVD NPDKIGFFGN KPVFGFNLSP RLNPSKGSLS MFPATEFLAN QNRREDSHAA  60
ASSDGEKRVV VGEVDFFSDK KKANDILIKK EDCHGEDKMK TNMDVVNTGL QLVIANTGSD  120
QSTVDDGVSS DIEDKRAKLE LAQLQVELER MNAENRRLRE MLSQVSNNYT ALQMHLMTLM  180
HQQQQNAKPQ TTQDHEIGER KSEENKPENG GVVVPRQFLD LGPSGTAEMD EPTNSSSEER  240
TLSGSPRNNM ELSRNKGVGR EESPESQGWA PNKVAKLNAP SKTVDHAQAE ATMRKARVSV  300
RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAVG CPVRKQVQRC AEDRTVLITT  360
YEGTHNHPLP PAAMAMASTT SAAANMLLSG SMSSADGLMN PNFLARTILP CSSNMATISA  420
SAPFPTVTLD LTQTPNPLQF QRQPSTPFQL PFGTPPQNFP PVANPQMHQV FGQALYNQSK  480
FSGLQVSQDI EAAAAAAAQM QNQGQHPQVQ QGQHQPSFAD TLSAATAAIT ADPNFTAALA  540
AAISSIIGGS HPSSSNNSNP TTSTPPTANF PGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-130WRKY family protein