PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027085633.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 602aa    MW: 67658 Da    PI: 5.6326
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027085633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS284.82.4e-872105811374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalklfsevsPil 91 
                     lv+ Ll+ Ae+v+++++e+a +lL r  +l+s +g++++Rl+ yf  AL++r+ r++ ++      + +s  +    +s  ++a  + ++  P+ 
  XP_027085633.1 210 LVQHLLASAEFVAKKQFERAGKLLLRCDKLSSDHGNTIERLVYYFSGALHERIDRETGTVTPEGLGKMQSI-DildmMSGLTSAKIVMQKSVPFG 303
                     6899***************************************************4444443332222221.223444444555555******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                     ++++++  q +l+ v+ ++++Hi+D++i  G+++  L+qaLa+R+ ++   l++T++g    +sk ++eetg++La+fA+ l+++f++n+++  +
  XP_027085633.1 304 QVCQFAGTQGVLDHVADATKIHIVDLEIRTGMHYTILMQALATRSqNPLEYLKVTAIGT---KSKAKIEETGRQLASFAQVLKLKFSINIIMLAD 395
                     *********************************************455569********...689****************************** PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                     + dl+ + ++++p+Ea+aV + +  + + +++  les    ++++vk ++P+v++v+e e +hns+ F++rf+eal +y a+fdsle  l ++ +
  XP_027085633.1 396 IMDLNENLFEINPDEAVAVWVEYYFMFMISRQDMLES----LMNVVKAINPRVMIVTEVEGNHNSPVFVTRFIEALFFYGAFFDSLEDCLKHDPK 486
                     ********************99998888855555555....****************************************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +r+ vE ++l+++i+n+va+eg+er+ r+  ++ W++ + ++G+ +v+ls + + qa+l+l++++ +   +++++ + l++gWk+ p+ s+SaW+
  XP_027085633.1 487 NRMIVESVYLSQAIRNIVATEGEERTIRQVAVNVWKAFFARFGMVQVELSMSSMYQANLVLKNFEcGSSCTLNKDGKGLIIGWKGTPIHSLSAWK 581
                     *****************************************************************9999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MEMFHSDHFE FLGVSGKYDS TEGFQFEDHG REENQNCLIT NDDEREASKG IGSFYPGTLG  60
SNQVHDSTAE KGVIYSKLHQ EQQLKDLTGF ACFNDPREEE ITKLADDVAF ANSEFNDANK  120
ERPYAGSLRI LKNYRRRFRK LSVEKMDLPS YQGCTLITGH KLSTDAILKL AAQNFIQSSS  180
KGTTESFELS HPYASSFGGL CVEDTKDVKL VQHLLASAEF VAKKQFERAG KLLLRCDKLS  240
SDHGNTIERL VYYFSGALHE RIDRETGTVT PEGLGKMQSI DILDMMSGLT SAKIVMQKSV  300
PFGQVCQFAG TQGVLDHVAD ATKIHIVDLE IRTGMHYTIL MQALATRSQN PLEYLKVTAI  360
GTKSKAKIEE TGRQLASFAQ VLKLKFSINI IMLADIMDLN ENLFEINPDE AVAVWVEYYF  420
MFMISRQDML ESLMNVVKAI NPRVMIVTEV EGNHNSPVFV TRFIEALFFY GAFFDSLEDC  480
LKHDPKNRMI VESVYLSQAI RNIVATEGEE RTIRQVAVNV WKAFFARFGM VQVELSMSSM  540
YQANLVLKNF ECGSSCTLNK DGKGLIIGWK GTPIHSLSAW KFGCDSKNED LDFDLLNLSS  600
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.18e-57GRAS family protein